Bootstrap build started on Sat Apr 29 22:00:15 2023 LANG=C.UTF-8 TERM=xterm-256color SHELL=/bin/bash NAME=Azimuth SHLVL=2 OLDPWD=/mnt/c/Users/phaserbuilder/NightlyBuilds/PhaserPy3WSL WSL_DISTRO_NAME=Ubuntu-18.04 HOSTTYPE=x86_64 PWD=/mnt/c/Users/phaserbuilder/NightlyBuilds/PhaserPy3WSL LOGNAME=phaserbuilder USER=phaserbuilder PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt/c/WINDOWS/System32/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.0/:/mnt/c/WINDOWS/System32/OpenSSH/:/mnt/c/Utilities:/mnt/c/Program Files/TortoiseSVN/bin:/mnt/c/Program Files (x86)/NSIS/Unicode:/mnt/c/Program Files/Git/cmd:/mnt/c/Program Files/PuTTY/:/mnt/c/Program Files/TortoiseGit/bin:/mnt/c/Program Files/dotnet/:/mnt/c/Users/phaserbuilder/AppData/Local/Microsoft/WindowsApps HOME=/home/phaserbuilder WSLENV= _=/usr/bin/python Using compiler: g++ (Ubuntu 7.3.0-16ubuntu3) 7.3.0 Copyright (C) 2017 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. curl https://gitlab.developers.cam.ac.uk/scm/haematology/readgroup/phaser_regression/-/raw/master/MakeRegressionTestContents.py > MakeRegressionTestContents.py % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 8384 100 8384 0 0 37262 0 --:--:-- --:--:-- --:--:-- 37262 None curl https://raw.githubusercontent.com/cctbx/cctbx_project/master/libtbx/auto_build/bootstrap.py > bootstrap.py % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 103k 100 103k 0 0 436k 0 --:--:-- --:--:-- --:--:-- 436k None "/usr/bin/python" bootstrap.py --builder=phaser --use_conda --verbose --python=38 --nproc=23 Already up to date. Current branch master is up to date. From https://github.com/cctbx/cctbx_project 1bb715e572..df5b512ab8 master -> origin/master Auto packing the repository in background for optimum performance. See "git help gc" for manual housekeeping. Updating 1bb715e572..df5b512ab8 Fast-forward Auto packing the repository in background for optimum performance. See "git help gc" for manual housekeeping. mmtbx/solvent/ordered_solvent.py | 4 ++++ xfel/command_line/drift.py | 12 ++++++++++++ xfel/util/drift.py | 27 +++++++++++++++------------ xfel/util/weather.py | 16 ++++++++-------- 4 files changed, 39 insertions(+), 20 deletions(-) create mode 100644 xfel/command_line/drift.py Current branch master is up to date. Auto packing the repository in background for optimum performance. See "git help gc" for manual housekeeping. Writing files containing version information for cctbx_project =============================================================================== Wrote /mnt/c/Users/phaserbuilder/NightlyBuilds/PhaserPy3WSL/Current/modules/cctbx_project/libtbx/../../cctbx_project/cctbx_version.txt Wrote /mnt/c/Users/phaserbuilder/NightlyBuilds/PhaserPy3WSL/Current/modules/cctbx_project/libtbx/../../cctbx_project/cctbx_version.h Wrote /mnt/c/Users/phaserbuilder/NightlyBuilds/PhaserPy3WSL/Current/modules/cctbx_project/libtbx/../../cctbx_project/setup.py =============================================================================== Already up to date. Current branch master is up to date. fatal: unable to access 'https://gitlab.developers.cam.ac.uk/scm/haematology/readgroup/phaser_regression.git/': server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none Performing actions: hot update base build Installing base packages using: /usr/bin/python modules/cctbx_project/libtbx/auto_build/install_conda.py --builder=phaser --install_conda --python=38 ===== Running in modules/boost: git pull --rebase ===== Running in modules/cctbx_project: git pull --rebase ===== Running in modules/cctbx_project: /usr/bin/python libtbx/version.py Existing non-git directory -- don't know what to do. skipping: ccp4io Existing non-git directory -- don't know what to do. skipping: ccp4io_adaptbx Existing non-git directory -- don't know what to do. skipping: annlib ===== Running in modules/annlib_adaptbx: git pull --rebase Existing non-git directory -- don't know what to do. skipping: eigen Existing non-git directory -- don't know what to do. skipping: tntbx ===== Running in modules/phaser_regression: git pull --rebase Process failed with return code 1 None