11/10/2019 12:00:24.66 11/10/2019 12:00:24.95 C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty dist /MIR /COPYALL 1>nul ) & rmdir /S /Q dist\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty tests /MIR /COPYALL 1>nul ) & rmdir /S /Q tests\ & ) C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty doc /MIR /COPYALL 1>nul ) & rmdir /S /Q doc\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty base /MIR /COPYALL 1>nul ) & rmdir /S /Q base\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty base_tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q base_tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty build /MIR /COPYALL 1>nul ) & rmdir /S /Q build\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current>((ROBOCOPY empty conda_base /MIR /COPYALL 1>nul ) & rmdir /S /Q conda_base\ & ) The system cannot find the file specified. Performing actions: cleanup hot update ===== Running in .: deleting dist, tests, doc, tmp, base, base_tmp, build, conda_base ===== Downloading https://drive.google.com/uc?id=1YD_KDXrfhJ5ryT97j4yxmbAPoecGLjg0&export=download: 0.5 MB [0%.........20%.........40%.........60%.........80%.........100%] ===== Running in modules: extracting files from annlib.gz ===== Downloading https://drive.google.com/uc?id=1hPd5cMbVcsN4j0P5qaPUV71XS_aifw-J&export=download: 0.9 MB [0%.........20%.........40%.........60%.........80%.........100%] ===== Running in modules: extracting files from scons.gz ===== Downloading https://drive.google.com/uc?id=1EF6AqowSrVnse7pRtRmIsvhS6Q0dsSLT&export=download: ('The read operation timed out',) ===== Running in modules: extracting files from ccp4io.gz ===== Downloading https://drive.google.com/uc?id=138kErrF35WbnRRARqUczWaroao2w8p1A&export=download: ('The read operation timed out',) ===== Running in modules: extracting files from eigen.gz ===== Downloading https://drive.google.com/uc?id=1xWAj59zoyVn26EoIuBrw7KLNRyGjS5wC&export=download: 0.6 MB [0%.........20%.........40%.........60%.........80%.........100%] Already up to date. Current branch master is up to date. From https://github.com/cctbx/cctbx_project e8fec8d43..21de8b257 master -> origin/master c4f5d7c41..140d48565 xfel_datasets -> origin/xfel_datasets Updating e8fec8d43..21de8b257 Fast-forward .azure-pipelines/azure-pipelines-base.yml | 2 +- .azure-pipelines/azure-pipelines-nightly.yml | 30 +++---- .azure-pipelines/base-linux.yml | 2 +- .../{azure-pipelines-linux.yml => conda-linux.yml} | 12 ++- .../{azure-pipelines-osx.yml => conda-osx.yml} | 0 .../{azure-pipelines-win.yml => conda-win.yml} | 0 .../{azure-pipelines-syntax.yml => syntax.yml} | 0 .azure-pipelines/unix-conda-build.yml | 1 - azure-pipelines.yml | 10 +-- crys3d/hklview/NGL_HKLviewerGui.py | 47 ++++++----- crys3d/hklview/cmdlineframes.py | 24 +++++- crys3d/hklview/jsview_3d.py | 64 +++++++++------ libtbx/env_config.py | 91 ---------------------- 13 files changed, 126 insertions(+), 157 deletions(-) rename .azure-pipelines/{azure-pipelines-linux.yml => conda-linux.yml} (82%) rename .azure-pipelines/{azure-pipelines-osx.yml => conda-osx.yml} (100%) rename .azure-pipelines/{azure-pipelines-win.yml => conda-win.yml} (100%) rename .azure-pipelines/{azure-pipelines-syntax.yml => syntax.yml} (100%) Current branch master is up to date. Already up to date. Current branch master is up to date. ===== Running in modules: extracting files from clipper.gz ===== Running in modules\cbflib: git pull --rebase ===== Running in modules\cctbx_project: git pull --rebase ===== Running in modules\annlib_adaptbx: git pull --rebase ===== Downloading https://drive.google.com/uc?id=1bDE_rF6iL0SeyplHSTNsfJyI1G1h7ZZv&export=download: 35.1 kB [0%.........20%.........40%.........60%.........80%.........100%] Already up to date. Current branch master is up to date. ===== Running in modules: extracting files from tntbx.gz ===== Running in modules\dxtbx: git pull --rebase ===== Downloading https://drive.google.com/uc?id=1X5kRE90KkV2yTEyF9zb-PHOjjRXjzYvx&export=download: 202.5 kB [0%.........20%.........40%.........60%.........80%.........100%] Already up to date. Current branch master is up to date. ===== Running in modules: extracting files from ccp4io_adaptbx.gz ===== Running in modules\boost: git pull --rebase ===== Downloading https://drive.google.com/uc?id=1TTibOePamkUiIvwDJF-OMmdgX8jdgNUS&export=download: 2096 kB ===== Running in modules: extracting files from gui_resources.gz removing .pyc files in C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current\modules, walk? True removed 100 files Bootstrap success: cleanup, hot, update 11/10/2019 12:01:29.64 11/10/2019 12:01:29.72 Performing actions: base build Installing base packages using: python modules\cctbx_project\libtbx\auto_build\install_conda.py --builder=cctbx Traceback (most recent call last): File "bootstrap.py", line 2721, in run() File "bootstrap.py", line 2716, in run use_conda=options.use_conda, File "bootstrap.py", line 1119, in __init__ self.add_configure() File "bootstrap.py", line 1753, in add_configure self.python_base = self._get_conda_python() File "bootstrap.py", line 1513, in _get_conda_python m = self._get_conda_manager() File "bootstrap.py", line 1503, in _get_conda_manager check_file=check_file, log=log) File "C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current\modules\cctbx_project\libtbx\auto_build\install_conda.py", line 325, in __init__ env=self.env)) File "C:\Users\phaserbuilder\NightlyBuilds\CCTBXVC2008\x64\Current\modules\cctbx_project\libtbx\auto_build\install_conda.py", line 57, in check_output returncode = subprocess.check_call(command_list, stdout=f, *args, **kwargs) File "C:\Python27amd64\lib\subprocess.py", line 190, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['cmd', '/c', 'C:\\Users\\phaserbuilder\\PhaserTng2\\mc3\\Scripts\\conda.exe', 'info', '--json']' returned non-zero exit status 1 11/10/2019 12:01:34.58