08/06/2020 6:00:03.11 Get bootstrap.py % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 99243 100 99243 0 0 99243 0 0:00:01 --:--:-- 0:00:01 200k 08/06/2020 6:00:39.10 C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty dist /MIR /COPYALL 1>nul ) & rmdir /S /Q dist\ & ) C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tests /MIR /COPYALL 1>nul ) & rmdir /S /Q tests\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty doc /MIR /COPYALL 1>nul ) & rmdir /S /Q doc\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q tmp\ & ) C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base /MIR /COPYALL 1>nul ) & rmdir /S /Q base\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base_tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q base_tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty build /MIR /COPYALL 1>nul ) & rmdir /S /Q build\ & ) C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty conda_base /MIR /COPYALL 1>nul ) & rmdir /S /Q conda_base\ & ) Performing actions: cleanup hot update base build ******************************************************************************* An environment containing git-lfs and/or svn will be installed during the "base" step. Pleaser re-run the "update" step after "base" completes, so that git-lfs files for phenix_regression will be downloaded. ******************************************************************************* ******************************************************************************* An environment containing git-lfs and/or svn will be installed during the "base" step. Pleaser re-run the "update" step after "base" completes, so that git-lfs files for phenix_examples will be downloaded. ******************************************************************************* Installing base packages using: python modules\cctbx_project\libtbx\auto_build\install_conda.py --builder=phenix --install_conda --python=27 ===== Running in .: deleting dist, tests, doc, tmp, base, base_tmp, build, conda_base ===== Running in modules: create remote temporary archive builder@cci.lbl.gov:2s6fee_annlib.tar.gz ===== Running in modules: getting remote file builder@cci.lbl.gov:2s6fee_annlib.tar.gz ===== Running in modules: delete remote temporary archive of annlib ===== Running in modules: extracting archive files to annlib ===== Running in modules: delete local temporary archive of annlib Existing non-git directory -- don't know what to do. skipping: scons ===== Running in modules: create remote temporary archive builder@cci.lbl.gov:ppascn_ccp4io.tar.gz ===== Running in modules: getting remote file builder@cci.lbl.gov:ppascn_ccp4io.tar.gz ===== Running in modules: delete remote temporary archive of ccp4io ===== Running in modules: extracting archive files to ccp4io ===== Running in modules: delete local temporary archive of ccp4io ===== Running in modules: create remote temporary archive builder@cci.lbl.gov:vgtbtw_eigen.tar.gz ===== Running in modules: getting remote file builder@cci.lbl.gov:vgtbtw_eigen.tar.gz ===== Running in modules: delete remote temporary archive of eigen ===== Running in modules: extracting archive files to eigen ===== Running in modules: delete local temporary archive of eigen ===== Downloading https://gitcdn.xyz/repo/dials/dependencies/dials-1.13/msgpack-3.1.1.tar.gz: 484 kB Already up to date. Current branch master is up to date. Updating 'probe': At revision 103. Updating 'reduce': At revision 317. Already up to date. Current branch master is up to date. Already up to date. Current branch master is up to date. Updating 'ccp4io_adaptbx': At revision 143. Updating 'clipper': At revision 19. Updating 'ksdssp': At revision 14. Updating 'opt_resources': At revision 6. Updating 'Plex': At revision 8. Updating 'tntbx': At revision 50. Updating 'pulchra': At revision 8. Updating 'PyQuante': At revision 25. Already up to date. Current branch master is up to date. Already up to date. Current branch master is up to date. Cloning into 'cctbx_project'... POST git-upload-pack (gzip 2425 to 1266 bytes) remote: Enumerating objects: 51, done. remote: Counting objects: 1% (1/51) remote: Counting objects: 3% (2/51) remote: Counting objects: 5% (3/51) remote: Counting objects: 7% (4/51) remote: Counting objects: 9% (5/51) remote: Counting objects: 11% (6/51) remote: Counting objects: 13% (7/51) remote: Counting objects: 15% (8/51) remote: Counting objects: 17% (9/51) remote: Counting objects: 19% (10/51) remote: Counting objects: 21% (11/51) remote: Counting objects: 23% (12/51) remote: Counting objects: 25% (13/51) remote: Counting objects: 27% (14/51) remote: Counting objects: 29% (15/51) remote: Counting objects: 31% (16/51) remote: Counting objects: 33% (17/51) remote: Counting objects: 35% (18/51) remote: Counting objects: 37% (19/51) remote: Counting objects: 39% (20/51) remote: Counting objects: 41% (21/51) remote: Counting objects: 43% (22/51) remote: Counting objects: 45% (23/51) remote: Counting objects: 47% (24/51) remote: Counting objects: 49% (25/51) remote: Counting objects: 50% (26/51) remote: Counting objects: 52% (27/51) remote: Counting objects: 54% (28/51) remote: Counting objects: 56% (29/51) remote: Counting objects: 58% (30/51) remote: Counting objects: 60% (31/51) remote: Counting objects: 62% (32/51) remote: Counting objects: 64% (33/51) remote: Counting objects: 66% (34/51) remote: Counting objects: 68% (35/51) remote: Counting objects: 70% (36/51) remote: Counting objects: 72% (37/51) remote: Counting objects: 74% (38/51) remote: Counting objects: 76% (39/51) remote: Counting objects: 78% (40/51) remote: Counting objects: 80% (41/51) remote: Counting objects: 82% (42/51) remote: Counting objects: 84% (43/51) remote: Counting objects: 86% (44/51) remote: Counting objects: 88% (45/51) remote: Counting objects: 90% (46/51) remote: Counting objects: 92% (47/51) remote: Counting objects: 94% (48/51) remote: Counting objects: 96% (49/51) remote: Counting objects: 98% (50/51) remote: Counting objects: 100% (51/51) remote: Counting objects: 100% (51/51), done. remote: Compressing objects: 2% (1/37) remote: Compressing objects: 5% (2/37) remote: Compressing objects: 8% (3/37) remote: Compressing objects: 10% (4/37) remote: Compressing objects: 13% (5/37) remote: Compressing objects: 16% (6/37) remote: Compressing objects: 18% (7/37) remote: Compressing objects: 21% (8/37) remote: Compressing objects: 24% (9/37) remote: Compressing objects: 27% (10/37) remote: Compressing objects: 29% (11/37) remote: Compressing objects: 32% (12/37) remote: Compressing objects: 35% (13/37) remote: Compressing objects: 37% (14/37) remote: Compressing objects: 40% (15/37) remote: Compressing objects: 43% (16/37) remote: Compressing objects: 45% (17/37) remote: Compressing objects: 48% (18/37) remote: Compressing objects: 51% (19/37) remote: Compressing objects: 54% (20/37) remote: Compressing objects: 56% (21/37) remote: Compressing objects: 59% (22/37) remote: Compressing objects: 62% (23/37) remote: Compressing objects: 64% (24/37) remote: Compressing objects: 67% (25/37) remote: Compressing objects: 70% (26/37) remote: Compressing objects: 72% (27/37) remote: Compressing objects: 75% (28/37) remote: Compressing objects: 78% (29/37) remote: Compressing objects: 81% (30/37) remote: Compressing objects: 83% (31/37) remote: Compressing objects: 86% (32/37) remote: Compressing objects: 89% (33/37) remote: Compressing objects: 91% (34/37) remote: Compressing objects: 94% (35/37) remote: Compressing objects: 97% (36/37) remote: Compressing objects: 100% (37/37) remote: Compressing objects: 100% (37/37), done. Receiving objects: 0% (1/254972) Receiving objects: 1% (2550/254972) Receiving objects: 2% (5100/254972), 792.01 KiB | 1.54 MiB/s Receiving objects: 3% (7650/254972), 792.01 KiB | 1.54 MiB/s Receiving objects: 3% (8592/254972), 792.01 KiB | 1.54 MiB/s Receiving objects: 4% (10199/254972), 1.73 MiB | 1.72 MiB/s Receiving objects: 5% (12749/254972), 1.73 MiB | 1.72 MiB/s Receiving objects: 6% (15299/254972), 2.67 MiB | 1.78 MiB/s Receiving objects: 7% (17849/254972), 2.67 MiB | 1.78 MiB/s Receiving objects: 7% (18363/254972), 2.67 MiB | 1.78 MiB/s Receiving objects: 8% (20398/254972), 3.58 MiB | 1.79 MiB/s Receiving objects: 9% (22948/254972), 3.58 MiB | 1.79 MiB/s Receiving objects: 10% (25498/254972), 4.55 MiB | 1.82 MiB/s Receiving objects: 11% (28047/254972), 4.55 MiB | 1.82 MiB/s Receiving objects: 11% (28141/254972), 4.55 MiB | 1.82 MiB/s Receiving objects: 12% (30597/254972), 5.54 MiB | 1.84 MiB/s Receiving objects: 13% (33147/254972), 6.50 MiB | 1.85 MiB/s Receiving objects: 14% (35697/254972), 6.50 MiB | 1.85 MiB/s Receiving objects: 14% (37895/254972), 16.15 MiB | 4.03 MiB/s Receiving objects: 15% (38246/254972), 16.15 MiB | 4.03 MiB/s Receiving objects: 16% (40796/254972), 16.15 MiB | 4.03 MiB/s Receiving objects: 17% (43346/254972), 16.15 MiB | 4.03 MiB/s Receiving objects: 18% (45895/254972), 25.39 MiB | 5.63 MiB/s Receiving objects: 18% (46373/254972), 25.39 MiB | 5.63 MiB/s Receiving objects: 19% (48445/254972), 35.38 MiB | 7.68 MiB/s Receiving objects: 20% (50995/254972), 35.38 MiB | 7.68 MiB/s Receiving objects: 21% (53545/254972), 35.38 MiB | 7.68 MiB/s Receiving objects: 22% (56094/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 23% (58644/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 24% (61194/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 25% (63743/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 26% (66293/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 27% (68843/254972), 43.80 MiB | 9.34 MiB/s Receiving objects: 28% 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objects: 43% (109638/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 44% (112188/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 45% (114738/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 46% (117288/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 47% (119837/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 47% (122261/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 48% (122387/254972), 63.95 MiB | 13.41 MiB/s Receiving objects: 49% (124937/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 50% (127486/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 51% (130036/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 52% (132586/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 53% (135136/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 54% (137685/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 55% (140235/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 56% (142785/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 57% (145335/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 58% (147884/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 59% (150434/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 60% (152984/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 61% (155533/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 62% (158083/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 63% (160633/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 64% (163183/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 65% (165732/254972), 75.45 MiB | 15.75 MiB/s Receiving objects: 66% (168282/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 67% (170832/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 68% (173381/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 69% (175931/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 70% (178481/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 71% (181031/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 72% (183580/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 73% (186130/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 74% (188680/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 75% (191229/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 76% (193779/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 77% (196329/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 78% (198879/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 79% (201428/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 80% (203978/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 81% (206528/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 82% (209078/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 83% (211627/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 83% (212474/254972), 84.36 MiB | 17.52 MiB/s Receiving objects: 84% (214177/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 85% (216727/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 86% (219276/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 87% (221826/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 88% (224376/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 89% (226926/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 90% (229475/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 91% (232025/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 92% (234575/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 93% (237124/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 94% (239674/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 95% (242224/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 96% (244774/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 97% (247323/254972), 90.83 MiB | 18.74 MiB/s Receiving objects: 98% (249873/254972), 94.83 MiB | 17.48 MiB/s Receiving objects: 99% (252423/254972), 94.83 MiB | 17.48 MiB/s remote: Total 254972 (delta 20), reused 31 (delta 14), pack-reused 254921 Receiving objects: 100% (254972/254972), 94.83 MiB | 17.48 MiB/s Receiving objects: 100% (254972/254972), 97.01 MiB | 11.19 MiB/s, done. Resolving deltas: 0% (0/201582) Resolving deltas: 1% (2021/201582) Resolving deltas: 2% (4120/201582) Resolving deltas: 3% (6052/201582) Resolving deltas: 4% (8085/201582) Resolving deltas: 4% (9632/201582) Resolving deltas: 5% (10116/201582) Resolving deltas: 6% (12095/201582) Resolving deltas: 7% (14121/201582) Resolving deltas: 8% (16177/201582) Resolving deltas: 9% (18163/201582) Resolving deltas: 9% (18715/201582) Resolving deltas: 10% (20160/201582) Resolving deltas: 11% (22178/201582) Resolving deltas: 12% (24191/201582) Resolving deltas: 13% (26210/201582) Resolving deltas: 14% (28254/201582) Resolving deltas: 14% (28373/201582) Resolving deltas: 15% (30392/201582) Resolving deltas: 16% (32278/201582) Resolving deltas: 17% (34279/201582) Resolving deltas: 18% (36288/201582) Resolving deltas: 18% (38058/201582) Resolving deltas: 19% (38322/201582) Resolving deltas: 20% (40340/201582) Resolving deltas: 21% (42333/201582) Resolving deltas: 22% (44355/201582) Resolving deltas: 23% (46370/201582) Resolving deltas: 23% (47671/201582) Resolving deltas: 24% (48430/201582) Resolving deltas: 25% (50500/201582) Resolving deltas: 26% (52449/201582) Resolving deltas: 27% (54436/201582) Resolving deltas: 28% (56448/201582) Resolving deltas: 28% (57044/201582) Resolving deltas: 29% (58481/201582) Resolving deltas: 30% (60478/201582) Resolving deltas: 31% (62496/201582) Resolving deltas: 32% (64513/201582) Resolving deltas: 33% (66534/201582) Resolving deltas: 33% (66805/201582) Resolving deltas: 34% (68540/201582) Resolving deltas: 35% (70568/201582) Resolving deltas: 36% (72598/201582) Resolving deltas: 37% (74587/201582) Resolving deltas: 38% (76610/201582) Resolving deltas: 39% (78631/201582) Resolving deltas: 40% (80653/201582) Resolving deltas: 41% (82657/201582) Resolving deltas: 42% (84699/201582) Resolving deltas: 42% (85473/201582) Resolving deltas: 43% (86707/201582) Resolving deltas: 44% (89127/201582) Resolving deltas: 45% (90943/201582) Resolving deltas: 46% (92812/201582) Resolving deltas: 46% (94169/201582) Resolving deltas: 47% (94750/201582) Resolving deltas: 48% (96780/201582) Resolving deltas: 49% (98937/201582) Resolving deltas: 50% (100945/201582) Resolving deltas: 51% (102819/201582) Resolving deltas: 51% (103648/201582) Resolving deltas: 52% (104920/201582) Resolving deltas: 53% (106904/201582) Resolving deltas: 54% (108861/201582) Resolving deltas: 55% (111117/201582) Resolving deltas: 55% (112595/201582) Resolving deltas: 56% (112886/201582) Resolving deltas: 57% (114927/201582) Resolving deltas: 58% (116923/201582) Resolving deltas: 59% (118971/201582) Resolving deltas: 60% (120995/201582) Resolving deltas: 60% (121864/201582) Resolving deltas: 61% (122982/201582) Resolving deltas: 62% (125023/201582) Resolving deltas: 63% (127001/201582) Resolving deltas: 64% (129021/201582) Resolving deltas: 64% (131022/201582) Resolving deltas: 65% (131029/201582) Resolving deltas: 66% (133073/201582) Resolving deltas: 67% (135062/201582) Resolving deltas: 68% (137110/201582) Resolving deltas: 69% (139123/201582) Resolving deltas: 69% (139899/201582) Resolving deltas: 70% (141166/201582) Resolving deltas: 71% (143166/201582) Resolving deltas: 72% (145204/201582) Resolving deltas: 73% (147214/201582) Resolving deltas: 73% (148967/201582) Resolving deltas: 74% (149172/201582) Resolving deltas: 75% (151222/201582) Resolving deltas: 76% (153221/201582) Resolving deltas: 77% (155246/201582) Resolving deltas: 78% (157241/201582) Resolving deltas: 78% (158445/201582) Resolving deltas: 79% (159250/201582) Resolving deltas: 80% (161306/201582) Resolving deltas: 81% (163287/201582) Resolving deltas: 82% (165308/201582) Resolving deltas: 82% (166524/201582) Resolving deltas: 83% (167330/201582) Resolving deltas: 84% (169373/201582) Resolving deltas: 85% (171452/201582) Resolving deltas: 86% (173361/201582) Resolving deltas: 86% (175241/201582) Resolving deltas: 87% (175401/201582) Resolving deltas: 88% (177396/201582) Resolving deltas: 89% (179410/201582) Resolving deltas: 90% (181476/201582) Resolving deltas: 91% (183442/201582) Resolving deltas: 91% (183940/201582) Resolving deltas: 92% (185478/201582) Resolving deltas: 93% (187483/201582) Resolving deltas: 94% (189536/201582) Resolving deltas: 95% (191504/201582) Resolving deltas: 95% (192590/201582) Resolving deltas: 96% (193620/201582) Resolving deltas: 97% (195565/201582) Resolving deltas: 98% (197569/201582) Resolving deltas: 99% (199575/201582) Resolving deltas: 99% (201049/201582) Resolving deltas: 100% (201582/201582) Resolving deltas: 100% (201582/201582), done. 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Current branch master is up to date. Updating 'suitename': At revision 11. Already up to date. Current branch master is up to date. Updating 'chem_data': Fetching external item into 'chem_data\geostd': External at revision 213. At revision 339. X chem_data\geostd Performing status on external item at 'chem_data\geostd': Already up to date. Current branch master is up to date. warning: redirecting to https://git.uis.cam.ac.uk/cimr-phaser/phaser_regression.git/ Already up to date. Current branch master is up to date. Updating 'reel': At revision 265. Updating 'phenix_html': At revision 1471. Updating 'king': At revision 28. Already up to date. Current branch master is up to date. Already up to date. Current branch master is up to date. Updating 'labelit': At revision 2088. Updating 'elbow': At revision 3847. Updating 'muscle': At revision 10. Updating 'gui_resources': At revision 59. Base conda installation: C:\Users\phaserbuilder\PhenixTestBuilds\phasertng\mc3 Installing phenix environment with: C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current\modules\phenix\conda_envs\phenix_py27_win-64.txt Completed installation into: C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current\conda_base Base conda installation: C:\Users\phaserbuilder\PhenixTestBuilds\phasertng\mc3 active environment : None user config file : C:\Users\phaserbuilder\.condarc populated config files : conda version : 4.7.12 conda-build version : not installed python version : 3.7.4.final.0 virtual packages : __cuda=9.2 base environment : C:\Users\phaserbuilder\PhenixTestBuilds\phasertng\mc3 (writable) channel URLs : https://repo.anaconda.com/pkgs/main/win-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/win-64 https://repo.anaconda.com/pkgs/r/noarch https://repo.anaconda.com/pkgs/msys2/win-64 https://repo.anaconda.com/pkgs/msys2/noarch package cache : C:\Users\phaserbuilder\PhenixTestBuilds\phasertng\mc3\pkgs C:\Users\phaserbuilder\.conda\pkgs C:\Users\phaserbuilder\AppData\Local\conda\conda\pkgs envs directories : C:\Users\phaserbuilder\PhenixTestBuilds\phasertng\mc3\envs C:\Users\phaserbuilder\.conda\envs C:\Users\phaserbuilder\AppData\Local\conda\conda\envs platform : win-64 user-agent : conda/4.7.12 requests/2.22.0 CPython/3.7.4 Windows/10 Windows/10.0.18362 administrator : False netrc file : None offline mode : False ------------------------------------------------------------------------------- Installing extra development environment containing: - git - git-lfs Collecting package metadata (current_repodata.json): ...working... failed CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: - An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(MaxRetryError('HTTPSConnectionPool(host=\'conda.anaconda.org\', port=443): Max retries exceeded with url: /conda-forge/win-64/current_repodata.json (Caused by SSLError("Can\'t connect to HTTPS URL because the SSL module is not available."))')) ******************************************************************************* There was a failure in constructing the conda environment. Attempt 1 of 5 will start 1 minute(s) from Mon Jun 8 06:12:12 2020. ******************************************************************************* Collecting package metadata (current_repodata.json): ...working... failed CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: - An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(MaxRetryError('HTTPSConnectionPool(host=\'conda.anaconda.org\', port=443): Max retries exceeded with url: /conda-forge/win-64/current_repodata.json (Caused by SSLError("Can\'t connect to HTTPS URL because the SSL module is not available."))')) ******************************************************************************* There was a failure in constructing the conda environment. Attempt 2 of 5 will start 2 minute(s) from Mon Jun 8 06:13:14 2020. ******************************************************************************* Collecting package metadata (current_repodata.json): ...working... failed CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: - An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(MaxRetryError('HTTPSConnectionPool(host=\'conda.anaconda.org\', port=443): Max retries exceeded with url: /conda-forge/win-64/current_repodata.json (Caused by SSLError("Can\'t connect to HTTPS URL because the SSL module is not available."))')) ******************************************************************************* There was a failure in constructing the conda environment. Attempt 3 of 5 will start 3 minute(s) from Mon Jun 8 06:15:16 2020. ******************************************************************************* Collecting package metadata (current_repodata.json): ...working... failed CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: - An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(MaxRetryError('HTTPSConnectionPool(host=\'conda.anaconda.org\', port=443): Max retries exceeded with url: /conda-forge/win-64/current_repodata.json (Caused by SSLError("Can\'t connect to HTTPS URL because the SSL module is not available."))')) ******************************************************************************* There was a failure in constructing the conda environment. Attempt 4 of 5 will start 4 minute(s) from Mon Jun 8 06:18:17 2020. ******************************************************************************* Collecting package metadata (current_repodata.json): ...working... failed CondaHTTPError: HTTP 000 CONNECTION FAILED for url Elapsed: - An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way. SSLError(MaxRetryError('HTTPSConnectionPool(host=\'conda.anaconda.org\', port=443): Max retries exceeded with url: /conda-forge/win-64/current_repodata.json (Caused by SSLError("Can\'t connect to HTTPS URL because the SSL module is not available."))')) ******************************************************************************* There was a failure in constructing the conda environment. Attempt 5 of 5 will start 5 minute(s) from Mon Jun 8 06:22:19 2020. ******************************************************************************* Traceback (most recent call last): File "modules\cctbx_project\libtbx\auto_build\install_conda.py", line 1069, in sys.exit(run()) File "modules\cctbx_project\libtbx\auto_build\install_conda.py", line 1053, in run m.create_dev_environment() File "modules\cctbx_project\libtbx\auto_build\install_conda.py", line 772, in create_dev_environment self._retry_command(command_list, text_messages[1], prefix) File "modules\cctbx_project\libtbx\auto_build\install_conda.py", line 608, in _retry_command """) RuntimeError: The conda environment could not be constructed. Please check that there is a working network connection for downloading conda packages. ===== Running in modules: extracting files from msgpack-3.1.1.tar.gz ===== Running in modules\dials: git pull --rebase ===== Running in modules: svn update probe --non-interactive --trust-server-cert ===== Running in modules: svn update reduce --non-interactive --trust-server-cert ===== Running in modules\dxtbx: git pull --rebase ===== Running in modules\amber_library: git pull --rebase ===== Running in modules: svn update ccp4io_adaptbx --non-interactive --trust-server-cert Existing non-git directory -- don't know what to do. skipping: solve_resolve ===== Running in modules: svn update clipper --non-interactive --trust-server-cert ===== Running in modules: svn update ksdssp --non-interactive --trust-server-cert Existing non-git directory -- don't know what to do. skipping: phenix_regression ===== Running in modules: svn update opt_resources --non-interactive --trust-server-cert Existing non-git directory -- don't know what to do. skipping: phenix ===== Running in modules: svn update Plex --non-interactive --trust-server-cert ===== Running in modules: svn update tntbx --non-interactive --trust-server-cert ===== Running in modules: svn update pulchra --non-interactive --trust-server-cert ===== Running in modules: svn update PyQuante --non-interactive --trust-server-cert ===== Running in modules\boost: git pull --rebase ===== Running in modules\iota: git pull --rebase ===== Running in modules: git clone --recursive https://github.com/cctbx/cctbx_project.git cctbx_project --progress --verbose setting branch master to rebase ===== Running in modules\cctbx_project: git rev-parse HEAD ===== Running in modules\annlib_adaptbx: git pull --rebase ===== Running in modules: svn update suitename --non-interactive --trust-server-cert ===== Running in modules\xia2: git pull --rebase ===== Running in modules: svn update chem_data --non-interactive --trust-server-cert ===== Running in modules\phaser: git pull --rebase ===== Running in modules\phaser_regression: git pull --rebase Existing non-git directory -- don't know what to do. skipping: phenix_examples ===== Running in modules: svn update reel --non-interactive --trust-server-cert ===== Running in modules: svn update phenix_html --non-interactive --trust-server-cert ===== Running in modules: svn update king --non-interactive --trust-server-cert ===== Running in modules\cbflib: git pull --rebase ===== Running in modules\amber_adaptbx: git pull --rebase ===== Running in modules: svn update labelit --non-interactive --trust-server-cert ===== Running in modules: svn update elbow --non-interactive --trust-server-cert ===== Running in modules: svn update muscle --non-interactive --trust-server-cert ===== Running in modules: svn update gui_resources --non-interactive --trust-server-cert removing .pyc files in C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current\modules, walk? True removed 125 files ===== Running in .: base ===== Running in .: C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current\conda_base\python.exe modules\cctbx_project\libtbx\auto_build\install_conda.py --install_dev_env --verbose Process failed with return code 1