27/10/2020 6:00:01.55 Get bootstrap.py % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 97k 100 97k 0 0 97k 0 0:00:01 --:--:-- 0:00:01 169k 27/10/2020 6:00:02.32 C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty dist /MIR /COPYALL 1>nul ) & rmdir /S /Q dist\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tests /MIR /COPYALL 1>nul ) & rmdir /S /Q tests\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty doc /MIR /COPYALL 1>nul ) & rmdir /S /Q doc\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base /MIR /COPYALL 1>nul ) & rmdir /S /Q base\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base_tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q base_tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty build /MIR /COPYALL 1>nul ) & rmdir /S /Q build\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty conda_base /MIR /COPYALL 1>nul ) & rmdir /S /Q conda_base\ & ) The system cannot find the file specified. Performing actions: cleanup hot update base build ******************************************************************************* An environment containing git-lfs and/or svn will be installed during the "base" step. Pleaser re-run the "update" step after "base" completes, so that git-lfs files for phenix_regression will be downloaded. ******************************************************************************* ******************************************************************************* An environment containing git-lfs and/or svn will be installed during the "base" step. Pleaser re-run the "update" step after "base" completes, so that git-lfs files for phenix_examples will be downloaded. ******************************************************************************* Installing base packages using: python modules\cctbx_project\libtbx\auto_build\install_conda.py --builder=phenix --install_conda --python=27 ===== Running in .: deleting dist, tests, doc, tmp, base, base_tmp, build, conda_base Existing non-git directory -- don't know what to do. skipping: scons ===== Downloading https://gitcdn.xyz/repo/dials/dependencies/dials-1.13/msgpack-3.1.1.tar.gz: 484 kB From https://github.com/dials/dials 6fbfa1f6f..a856dac09 combine_mpi -> origin/combine_mpi 92db73c62..d7edf8aa2 master -> origin/master + 37d8fa406...5b78af5c7 multiple_stills_view -> origin/multiple_stills_view (forced update) 8b93251cd..0f5cec2bc nproc=auto -> origin/nproc=auto 794bff46b..b6b6a80d6 reindex-cb-op-test -> origin/reindex-cb-op-test Already up to date. Current branch dials-2.2 is up to date. Your branch is up to date with 'origin/dials-2.2'. Already on 'dials-2.2' Branch 'dials-2.2' set up to track remote branch 'dials-2.2' from 'origin'. Updating 'probe': At revision 103. Updating 'reduce': At revision 324. From https://github.com/phenix-project/phenix_dev_doc ddbaef6..2a12561 master -> origin/master Updating ddbaef6..2a12561 Fast-forward regression/tst_doc_fit_ligand.py | 5 +-- regression/tst_doc_model_building_1.py | 5 +-- regression/tst_doc_model_building_2.py | 5 +-- regression/tst_doc_model_building_3.py | 5 +-- regression/tst_doc_model_building_morphing.py | 5 +-- regression/tst_doc_model_building_read_files.py | 48 ++----------------------- regression/tst_doc_model_building_sequence.py | 5 +-- regression/tst_doc_quick_reference.py | 5 +-- 8 files changed, 24 insertions(+), 59 deletions(-) Current branch master is up to date. Already up to date. Current branch master is up to date. There is no tracking information for the current branch. Please specify which branch you want to rebase against. See git-pull(1) for details. git pull If you wish to set tracking information for this branch you can do so with: git branch --set-upstream-to=origin/ master ===== Running in modules: extracting files from msgpack-3.1.1.tar.gz ===== Running in modules\dials: git pull --rebase ===== Running in modules\dials: git checkout dials-2.2 ===== Running in modules\dials: git branch --set-upstream-to=origin/dials-2.2 dials-2.2 Existing non-git directory -- don't know what to do. skipping: eigen ===== Running in modules: svn update probe --non-interactive --trust-server-cert ===== Running in modules: svn update reduce --non-interactive --trust-server-cert Existing non-git directory -- don't know what to do. skipping: ccp4io ===== Running in modules\phenix_dev_doc: git pull --rebase ===== Running in modules\amber_library: git pull --rebase Existing non-git directory -- don't know what to do. skipping: ccp4io_adaptbx ===== Running in modules\solve_resolve: git pull --rebase Process failed with return code 1