22/10/2021 6:00:02.11 Get bootstrap.py % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 10 101k 10 10968 0 0 10968 0 0:00:09 --:--:-- 0:00:09 33439 100 101k 100 101k 0 0 101k 0 0:00:01 --:--:-- 0:00:01 295k 22/10/2021 6:00:02.78 C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty dist /MIR /COPYALL 1>nul ) & rmdir /S /Q dist\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tests /MIR /COPYALL 1>nul ) & rmdir /S /Q tests\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty doc /MIR /COPYALL 1>nul ) & rmdir /S /Q doc\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base /MIR /COPYALL 1>nul ) & rmdir /S /Q base\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty base_tmp /MIR /COPYALL 1>nul ) & rmdir /S /Q base_tmp\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty build /MIR /COPYALL 1>nul ) & rmdir /S /Q build\ & ) The system cannot find the file specified. C:\Users\phaserbuilder\NightlyBuilds\PhenixVC2008\x64\Current>((ROBOCOPY empty conda_base /MIR /COPYALL 1>nul ) & rmdir /S /Q conda_base\ & ) The system cannot find the file specified. Performing actions: cleanup hot update base build Installing base packages using: python modules\cctbx_project\libtbx\auto_build\install_conda.py --builder=phenix --install_conda --python=27 ===== Running in .: deleting dist, tests, doc, tmp, base, base_tmp, build, conda_base Existing non-git directory -- don't know what to do. skipping: scons ===== Downloading https://gitcdn.link/repo/dials/dependencies/dials-1.13/msgpack-3.1.1.tar.gz: 484 kB From https://github.com/dials/dials + 949943610...f23cd51e4 dials-3.6rc -> origin/dials-3.6rc (forced update) Already up to date. Your branch is up to date with 'origin/dials-2.2'. Already on 'dials-2.2' Branch 'dials-2.2' set up to track remote branch 'dials-2.2' from 'origin'. From https://gitlab.developers.cam.ac.uk/scm/haematology/readgroup/voyager_regression dcfa0f8..daf0235 master -> origin/master Updating dcfa0f8..daf0235 Fast-forward .../R1030-D2/R1030-D2_R1030-D2_table_rellg.csv | 132 ++++++ CASP_Rel_eLLG/R1030-D2/test_R1030_D2.phil | 2 +- .../T1024-D1/T1024-D1_T1024-D1_table_rellg.csv | 513 +++++++++++++++++++++ .../T1038-D2_mini_folder_table_rellg.csv | 3 + 4 files changed, 649 insertions(+), 1 deletion(-) create mode 100644 CASP_Rel_eLLG/R1030-D2/R1030-D2_R1030-D2_table_rellg.csv create mode 100644 CASP_Rel_eLLG/T1024-D1/T1024-D1_T1024-D1_table_rellg.csv create mode 100644 CASP_Rel_eLLG/T1038-D2_bfact/T1038-D2_mini_folder_table_rellg.csv Updating 'probe': At revision 112. Already up to date. Already up to date. There is no tracking information for the current branch. Please specify which branch you want to rebase against. See git-pull(1) for details. git pull If you wish to set tracking information for this branch you can do so with: git branch --set-upstream-to=origin/ master ===== Running in modules: extracting files from msgpack-3.1.1.tar.gz ===== Running in modules\dials: git pull --rebase ===== Running in modules\dials: git checkout dials-2.2 ===== Running in modules\dials: git branch --set-upstream-to=origin/dials-2.2 dials-2.2 Existing non-git directory -- don't know what to do. skipping: eigen ===== Running in modules\voyager_regression: git pull --rebase ===== Running in modules: svn update probe --non-interactive --trust-server-cert Existing non-git directory -- don't know what to do. skipping: reduce Existing non-git directory -- don't know what to do. skipping: ccp4io ===== Running in modules\phenix_dev_doc: git pull --rebase ===== Running in modules\amber_library: git pull --rebase Existing non-git directory -- don't know what to do. skipping: ccp4io_adaptbx ===== Running in modules\solve_resolve: git pull --rebase Process failed with return code 1